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Grant support

We thank Dr. Myung Hee Park for eIF5A plasmids, Dr. Roy Parker for Pab1-GFP plasmid, and Dr. Helle Ulrich for the anti-Smt3 antibody. We thank Genentech for the anti-hipusine antibody (FabHpu24).

Analysis of institutional authors

Martinez-Ferriz, ArantxaAuthor

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Article

SUMOylation modulates eIF5A activities in both yeast and pancreatic ductal adenocarcinoma cells

Publicated to:Cellular & Molecular Biology Letters. 29 (1): 15- - 2024-01-16 29(1), DOI: 10.1186/s11658-024-00533-5

Authors: Seoane, Rocio; Lama-Diaz, Tomas; Romero, Antonia Maria; El Motiam, Ahmed; Martinez-Ferriz, Arantxa; Vidal, Santiago; Bouzaher, Yanis H; Blanquer, Maria; Tolosa, Rocio M; Castillo Mewa, Juan; Rodriguez, Manuel S; Garcia-Sastre, Adolfo; Xirodimas, Dimitris; Sutherland, James D; Barrio, Rosa; Alepuz, Paula; Blanco, Miguel G; Farras, Rosa; Rivas, Carmen

Affiliations

Basque Res & Technol Alliance BRTA, Ctr Cooperat Res Biosci CIC bioGUNE, Bizkaia Technol Pk,Bldg 801A, Derio 48160, Spain - Author
CNRS, Lab Chim Coordinat LCC, UPR 8241, F-31400 Toulouse, France - Author
CSIC, Dept Biol Mol & Celular, Ctr Nacl Biotecnol CNB, Darwin 3, Madrid 28049, Spain - Author
Ctr Andaluz Biol Mol & Med Regenerat CABIMER, C Amer Vespucio 24,Edificio Cabimer, Seville 41092, Spain - Author
Ctr Invest Principe Felipe, Valencia 46012, Spain - Author
Icahn Sch Med Mt Sinai, Dept Med, Div Infect Dis, New York, NY USA - Author
Icahn Sch Med Mt Sinai, Dept Microbiol, New York, NY USA - Author
Icahn Sch Med Mt Sinai, Global Hlth & Emerging Pathogens Inst, New York, NY 10029 USA - Author
Icahn Sch Med Mt Sinai, Tisch Canc Inst, New York, NY 10029 USA - Author
Inst Conmemorat Gorgas Estudios Salud, Res Dept Genom & Prote, Panama City 081602593, Panama - Author
Mt Sinai Hosp, Lunenfeld Tanenbaum Res Inst, Toronto, ON M5G 1X5, Canada - Author
Univ Montpellier, Montpellier Cell Biol Res Ctr CRBM, CNRS, UMR 5237, Montpellier, France - Author
Univ Santiago De Compostela, Ctr Invest Med Mol CIMUS, IDIS, Avda Barcelona, Santiago De Compostela 15706, Spain - Author
Univ Santiago De Compostela, Dept Bioquim & Biol Mol, Santiago De Compostela 15706, Spain - Author
Univ Valencia, Fac Ciencias Biol, Dept Bioquim & Biol Mol, Valencia 46100, Spain - Author
Univ Valencia, Inst Bio TecMed, Valencia 46100, Spain - Author
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Abstract

BackgroundThe eukaryotic translation initiation protein eIF5A is a highly conserved and essential factor that plays a critical role in different physiological and pathological processes including stress response and cancer. Different proteomic studies suggest that eIF5A may be a small ubiquitin-like modifier (SUMO) substrate, but whether eIF5A is indeed SUMOylated and how relevant is this modification for eIF5A activities are still unknown.MethodsSUMOylation was evaluated using in vitro SUMOylation assays, Histidine-tagged proteins purification from His6-SUMO2 transfected cells, and isolation of endogenously SUMOylated proteins using SUMO-binding entities (SUBES). Mutants were engineered by site-directed mutagenesis. Protein stability was measured by a cycloheximide chase assay. Protein localization was determined using immunofluorescence and cellular fractionation assays. The ability of eIF5A1 constructs to complement the growth of Saccharomyces cerevisiae strains harboring thermosensitive mutants of a yeast EIF5A homolog gene (HYP2) was analyzed. The polysome profile and the formation of stress granules in cells expressing Pab1-GFP (a stress granule marker) by immunofluorescence were determined in yeast cells subjected to heat shock. Cell growth and migration of pancreatic ductal adenocarcinoma PANC-1 cells overexpressing different eIF5A1 constructs were evaluated using crystal violet staining and transwell inserts, respectively. Statistical analysis was performed with GraphPad Software, using unpaired Student's t-test, or one-way or two-way analysis of variance (ANOVA).ResultsWe found that eIF5A is modified by SUMO2 in vitro, in transfected cells and under endogenous conditions, revealing its physiological relevance. We identified several SUMO sites in eIF5A and found that SUMOylation modulates both the stability and the localization of eIF5A in mammalian cells. Interestingly, the SUMOylation of eIF5A responds to specific stresses, indicating that it is a regulated process. SUMOylation of eIF5A is conserved in yeast, the eIF5A SUMOylation mutants are unable to completely suppress the defects of HYP2 mutants, and SUMOylation of eIF5A is important for both stress granules formation and disassembly of polysomes induced by heat-shock. Moreover, mutation of the SUMOylation sites in eIF5A abolishes its promigratory and proproliferative activities in PANC-1 cells.ConclusionsSUMO2 conjugation to eIF5A is a stress-induced response implicated in the adaptation of yeast cells to heat-shock stress and required to promote the growth and migration of pancreatic ductal adenocarcinoma cells.

Keywords

AdenocarcinomaAnimalsEf-pEif5aEif5a protein, s cerevisiaeHumansHypusineInitiation-factor 5aMammalsPancreatic ductal adenocarcinomaPromotes translationProteinProteomic analysisProteomicsSaccharomyces cerevisiaeSmall ubiquitin-related modifier proteinsStress granuleStress granulesStress responseSumoSumo2SumoylationTranslation elongationUbiquitiUbiquitin

Quality index

Bibliometric impact. Analysis of the contribution and dissemination channel

The work has been published in the journal Cellular & Molecular Biology Letters due to its progression and the good impact it has achieved in recent years, according to the agency WoS (JCR), it has become a reference in its field. In the year of publication of the work, 2024 there are still no calculated indicators, but in 2023, it was in position 29/205, thus managing to position itself as a Q1 (Primer Cuartil), in the category Cell Biology.

Independientemente del impacto esperado determinado por el canal de difusión, es importante destacar el impacto real observado de la propia aportación.

Según las diferentes agencias de indexación, el número de citas acumuladas por esta publicación hasta la fecha 2025-06-23:

  • WoS: 2
  • Scopus: 4
  • Europe PMC: 2
  • OpenCitations: 3

Impact and social visibility

From the perspective of influence or social adoption, and based on metrics associated with mentions and interactions provided by agencies specializing in calculating the so-called "Alternative or Social Metrics," we can highlight as of 2025-06-23:

  • The use, from an academic perspective evidenced by the Altmetric agency indicator referring to aggregations made by the personal bibliographic manager Mendeley, gives us a total of: 9.
  • The use of this contribution in bookmarks, code forks, additions to favorite lists for recurrent reading, as well as general views, indicates that someone is using the publication as a basis for their current work. This may be a notable indicator of future more formal and academic citations. This claim is supported by the result of the "Capture" indicator, which yields a total of: 9 (PlumX).

With a more dissemination-oriented intent and targeting more general audiences, we can observe other more global scores such as:

  • The Total Score from Altmetric: 0.5.
  • The number of mentions on the social network X (formerly Twitter): 1 (Altmetric).

It is essential to present evidence supporting full alignment with institutional principles and guidelines on Open Science and the Conservation and Dissemination of Intellectual Heritage. A clear example of this is:

  • The work has been submitted to a journal whose editorial policy allows open Open Access publication.

Leadership analysis of institutional authors

This work has been carried out with international collaboration, specifically with researchers from: Canada; France; Panama; United States of America.